STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hint3Histidine triad nucleotide binding protein 3. (167 aa)    
Predicted Functional Partners:
LOC111226674
Germ cell nuclear acidic peptidase.
    
 0.550
mnat1
MNAT1 component of CDK activating kinase.
    
 0.509
rrn3
RRN3 homolog, RNA polymerase I transcription factor.
    
 0.494
HINT1
Histidine triad nucleotide binding protein 1.
  
 
 0.492
tbp
TATA box binding protein.
    
 0.458
tbpl1
TBP-like 1.
    
 0.458
LOC111237051
Uncharacterized protein.
    
 0.458
tbpl2
TATA box binding protein like 2.
    
 0.458
Cunh11orf88
Uncharacterized protein.
    
 0.458
dmac2l
Distal membrane arm assembly complex 2 like.
   
    0.440
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.