STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSPH1Radial spoke head component 1. (241 aa)    
Predicted Functional Partners:
LOC111240095
Radial spoke head component 4A.
   
 
 0.946
rsph9
Radial spoke head 9 homolog.
   
 
 0.936
rsph3
Radial spoke head 3.
   
 
 0.712
zmynd10
Zinc finger, MYND-type containing 10.
   
 
 0.697
dnali1
Dynein, axonemal, light intermediate chain 1.
   
 
 0.679
ccdc103
Dynein_attach_N domain-containing protein.
   
  
 0.608
dnai2
Dynein, axonemal, intermediate chain 2b.
   
  
 0.604
LOC111229734
Structural maintenance of chromosomes protein.
      
 0.593
smc2
Structural maintenance of chromosomes protein.
      
 0.593
smc1a
Structural maintenance of chromosomes protein.
      
 0.593
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.