STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF146Ring finger protein 146. (374 aa)    
Predicted Functional Partners:
LOC111229052
Poly [ADP-ribose] polymerase.
    
 0.853
LOC111237050
Poly [ADP-ribose] polymerase.
    
 0.853
ENSSDUP00000028622
Poly [ADP-ribose] polymerase.
    
 0.853
parp1
Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.
    
 
 0.686
parp2
Poly [ADP-ribose] polymerase.
    
 
 0.680
AXIN2
Axin 2.
    
 0.658
LOC111227124
Axin 2 (conductin, axil).
    
 0.658
LOC111216635
Uncharacterized protein.
    
 0.658
axin1
Axin 1.
    
 0.658
trip12
Thyroid hormone receptor interactor 12.
      
 0.658
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.