lsm12 protein (Seriola dumerili) - STRING interaction network

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Predicted Interactions

gene neighborhood

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textmining

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protein homology

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[Homology]

Score

lsm12

LSM12 homolog b. (203 aa)

Predicted Functional Partners:

atxn2

0.884

atxn2l

0.884

LOC111219938

0.884

LOC111230535

0.816

LOC111236049

0.816

ddx6

0.816

LOC111223813

0.761

trnau1ap

0.761

lsm1

0.678

ENSSDUP00000013745

0.648

Your Current Organism:

Seriola dumerili

NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSDUP00000013745	atxn2	ENSSDUP00000013745	ENSSDUP00000001538	RNA transcription, translation and transport factor.	Ataxin 2.	0.419
ENSSDUP00000013745	lsm12	ENSSDUP00000013745	ENSSDUP00000017411	RNA transcription, translation and transport factor.	LSM12 homolog b.	0.648
LOC111219938	LOC111223813	ENSSDUP00000032042	ENSSDUP00000015203	LsmAD domain-containing protein.	tRNA selenocysteine 1 associated protein 1b.	0.630
LOC111219938	LOC111230535	ENSSDUP00000032042	ENSSDUP00000010308	LsmAD domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.654
LOC111219938	LOC111236049	ENSSDUP00000032042	ENSSDUP00000013382	LsmAD domain-containing protein.	DEAD (Asp-Glu-Ala-Asp) box helicase 61; Belongs to the DEAD box helicase family.	0.654
LOC111219938	ddx6	ENSSDUP00000032042	ENSSDUP00000027217	LsmAD domain-containing protein.	DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.	0.654
LOC111219938	lsm12	ENSSDUP00000032042	ENSSDUP00000017411	LsmAD domain-containing protein.	LSM12 homolog b.	0.884
LOC111219938	trnau1ap	ENSSDUP00000032042	ENSSDUP00000016076	LsmAD domain-containing protein.	tRNA selenocysteine 1 associated protein 1a.	0.630
LOC111223813	LOC111219938	ENSSDUP00000015203	ENSSDUP00000032042	tRNA selenocysteine 1 associated protein 1b.	LsmAD domain-containing protein.	0.630
LOC111223813	atxn2	ENSSDUP00000015203	ENSSDUP00000001538	tRNA selenocysteine 1 associated protein 1b.	Ataxin 2.	0.630
LOC111223813	atxn2l	ENSSDUP00000015203	ENSSDUP00000007987	tRNA selenocysteine 1 associated protein 1b.	Ataxin 2-like.	0.630
LOC111223813	lsm12	ENSSDUP00000015203	ENSSDUP00000017411	tRNA selenocysteine 1 associated protein 1b.	LSM12 homolog b.	0.761
LOC111230535	LOC111219938	ENSSDUP00000010308	ENSSDUP00000032042	Uncharacterized protein; Belongs to the DEAD box helicase family.	LsmAD domain-containing protein.	0.654
LOC111230535	LOC111236049	ENSSDUP00000010308	ENSSDUP00000013382	Uncharacterized protein; Belongs to the DEAD box helicase family.	DEAD (Asp-Glu-Ala-Asp) box helicase 61; Belongs to the DEAD box helicase family.	0.900
LOC111230535	atxn2	ENSSDUP00000010308	ENSSDUP00000001538	Uncharacterized protein; Belongs to the DEAD box helicase family.	Ataxin 2.	0.698
LOC111230535	atxn2l	ENSSDUP00000010308	ENSSDUP00000007987	Uncharacterized protein; Belongs to the DEAD box helicase family.	Ataxin 2-like.	0.654
LOC111230535	ddx6	ENSSDUP00000010308	ENSSDUP00000027217	Uncharacterized protein; Belongs to the DEAD box helicase family.	DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.	0.901
LOC111230535	lsm1	ENSSDUP00000010308	ENSSDUP00000030286	Uncharacterized protein; Belongs to the DEAD box helicase family.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.951
LOC111230535	lsm12	ENSSDUP00000010308	ENSSDUP00000017411	Uncharacterized protein; Belongs to the DEAD box helicase family.	LSM12 homolog b.	0.816
LOC111236049	LOC111219938	ENSSDUP00000013382	ENSSDUP00000032042	DEAD (Asp-Glu-Ala-Asp) box helicase 61; Belongs to the DEAD box helicase family.	LsmAD domain-containing protein.	0.654