STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem67Transmembrane protein 67. (978 aa)    
Predicted Functional Partners:
tmem216
Transmembrane protein 216.
   
 
 0.953
cc2d2a
Coiled-coil and C2 domain containing 2A.
   
 
 0.953
b9d1
B9 protein domain 1.
     
 0.951
ahi1
Abelson helper integration site 1.
     
 0.949
mks1
MKS transition zone complex subunit 1.
     
 0.931
tctn1
Tectonic family member 1.
   
 
 0.855
TMEM138
Transmembrane protein 138.
   
 
 0.845
tctn3
DUF1619 domain-containing protein.
   
 
 0.828
tctn2
Tectonic family member 2.
     
 0.795
nphp1
Nephronophthisis 1.
   
  
 0.702
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.