STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lckTyrosine-protein kinase. (501 aa)    
Predicted Functional Partners:
LOC111229549
Tyrosine-protein kinase.
  
0.704
CSK
Tyrosine-protein kinase.
  
0.702
LOC111225667
Tyrosine-protein kinase.
  
0.688
matk
Tyrosine-protein kinase.
  
0.678
LOC111230068
CD4-1 molecule.
   
 0.645
LOC111221167
Protein tyrosine phosphatase receptor type C.
   
 0.621
grb2
Growth factor receptor-bound protein 2b.
   
0.621
LOC111237647
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
    
 0.612
LOC111235530
Uncharacterized protein.
   
 0.603
syk
Tyrosine-protein kinase.
  
0.598
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.