rbsn protein (Seriola dumerili) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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Experiments

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[Homology]

Score

rbsn

Rabenosyn, RAB effector. (782 aa)

Predicted Functional Partners:

vps45

0.999

rab4a

0.985

LOC111232380

0.978

LOC111239289

0.976

LOC111238899

0.865

RAB17

0.841

LOC111223299

0.841

rab5a

0.841

LOC111218236

0.841

LOC111220140

0.841

Your Current Organism:

Seriola dumerili

NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111218236	LOC111238899	ENSSDUP00000024544	ENSSDUP00000007480	RAB5B, member RAS oncogene family.	RAB4B, member RAS oncogene family.	0.502
LOC111218236	rab4a	ENSSDUP00000024544	ENSSDUP00000000924	RAB5B, member RAS oncogene family.	RAB4a, member RAS oncogene family.	0.505
LOC111218236	rbsn	ENSSDUP00000024544	ENSSDUP00000017718	RAB5B, member RAS oncogene family.	Rabenosyn, RAB effector.	0.841
LOC111218236	vps45	ENSSDUP00000024544	ENSSDUP00000001834	RAB5B, member RAS oncogene family.	Vacuolar protein sorting 45 homolog; Belongs to the STXBP/unc-18/SEC1 family.	0.733
LOC111220140	LOC111238899	ENSSDUP00000029577	ENSSDUP00000007480	Uncharacterized protein.	RAB4B, member RAS oncogene family.	0.499
LOC111220140	rab4a	ENSSDUP00000029577	ENSSDUP00000000924	Uncharacterized protein.	RAB4a, member RAS oncogene family.	0.502
LOC111220140	rbsn	ENSSDUP00000029577	ENSSDUP00000017718	Uncharacterized protein.	Rabenosyn, RAB effector.	0.841
LOC111220140	vps45	ENSSDUP00000029577	ENSSDUP00000001834	Uncharacterized protein.	Vacuolar protein sorting 45 homolog; Belongs to the STXBP/unc-18/SEC1 family.	0.733
LOC111223299	LOC111238899	ENSSDUP00000013552	ENSSDUP00000007480	RAB5A, member RAS oncogene family, a.	RAB4B, member RAS oncogene family.	0.499
LOC111223299	rab4a	ENSSDUP00000013552	ENSSDUP00000000924	RAB5A, member RAS oncogene family, a.	RAB4a, member RAS oncogene family.	0.503
LOC111223299	rbsn	ENSSDUP00000013552	ENSSDUP00000017718	RAB5A, member RAS oncogene family, a.	Rabenosyn, RAB effector.	0.841
LOC111223299	vps45	ENSSDUP00000013552	ENSSDUP00000001834	RAB5A, member RAS oncogene family, a.	Vacuolar protein sorting 45 homolog; Belongs to the STXBP/unc-18/SEC1 family.	0.733
LOC111232380	rbsn	ENSSDUP00000022585	ENSSDUP00000017718	EH-domain containing 1a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Rabenosyn, RAB effector.	0.978
LOC111232380	vps45	ENSSDUP00000022585	ENSSDUP00000001834	EH-domain containing 1a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Vacuolar protein sorting 45 homolog; Belongs to the STXBP/unc-18/SEC1 family.	0.443
LOC111238899	LOC111218236	ENSSDUP00000007480	ENSSDUP00000024544	RAB4B, member RAS oncogene family.	RAB5B, member RAS oncogene family.	0.502
LOC111238899	LOC111220140	ENSSDUP00000007480	ENSSDUP00000029577	RAB4B, member RAS oncogene family.	Uncharacterized protein.	0.499
LOC111238899	LOC111223299	ENSSDUP00000007480	ENSSDUP00000013552	RAB4B, member RAS oncogene family.	RAB5A, member RAS oncogene family, a.	0.499
LOC111238899	RAB17	ENSSDUP00000007480	ENSSDUP00000008998	RAB4B, member RAS oncogene family.	RAB17, member RAS oncogene family.	0.506
LOC111238899	rab5a	ENSSDUP00000007480	ENSSDUP00000015753	RAB4B, member RAS oncogene family.	RAB5A, member RAS oncogene family, b.	0.500
LOC111238899	rbsn	ENSSDUP00000007480	ENSSDUP00000017718	RAB4B, member RAS oncogene family.	Rabenosyn, RAB effector.	0.865