STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111228509DnaJ heat shock protein family (Hsp40) member A2b. (426 aa)    
Predicted Functional Partners:
stip1
Stress-induced phosphoprotein 1.
   
 0.860
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
 
 0.851
ENSSDUP00000011941
Si:ch211-199o1.2.
 
 0.831
LOC111238863
Uncharacterized protein; Belongs to the heat shock protein 70 family.
 
 0.829
LOC111234021
Heat shock cognate 70; Belongs to the heat shock protein 70 family.
 
 0.828
HSPA8
Heat shock protein 8; Belongs to the heat shock protein 70 family.
 
 0.828
ENSSDUP00000004345
Uncharacterized protein; Belongs to the heat shock protein 70 family.
 
 0.827
LOC111222149
Uncharacterized protein; Belongs to the heat shock protein 70 family.
 
 0.827
hspa14
Heat shock protein 14; Belongs to the heat shock protein 70 family.
 
 0.791
hspa13
Heat shock protein 70 family, member 13.
 
 0.777
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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