STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111224471Thyroid hormone responsive. (139 aa)    
Predicted Functional Partners:
bambi
BMP and activin membrane-bound inhibitor homolog; Negatively regulates TGF-beta signaling. Belongs to the BAMBI family.
      
 0.577
LOC111224325
Si:dkey-61p9.11.
   
  
 0.574
LOC111224327
Carrier domain-containing protein.
   
  
 0.574
fasn
Coiled-coil domain containing 57.
   
  
 0.574
LOC111226963
Transmembrane protein 102.
    
  0.543
LOC111235579
MID1 interacting protein 1.
    
 
0.543
mb21d2
Mab-21 domain containing 2.
    
  0.543
mid1ip1
MID1 interacting protein 1.
    
 
0.543
mab21l1
Mab-21-like 1.
    
  0.543
mief1
Mitochondrial elongation factor 1.
    
  0.543
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.