STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL3ST1Galactose-3-O-sulfotransferase 1a. (425 aa)    
Predicted Functional Partners:
ugt8
UDP glycosyltransferase 8; Belongs to the UDP-glycosyltransferase family.
   
 
 0.926
galc
Galactosylceramidase b.
     
 0.924
LOC111234182
Uncharacterized protein.
  
  
 
0.902
gla
Alpha-galactosidase.
     
 0.901
LOC111229470
Uncharacterized protein.
  
  
 
0.901
LOC111234404
Sialidase 3 (membrane sialidase), tandem duplicate 1.
     
  0.900
neu4
Sialidase 4.
     
  0.900
neu1
Neuraminidase 1.
     
  0.900
LOC111237692
Sialidase domain-containing protein.
     
  0.900
LOC111237693
Sialidase domain-containing protein.
     
  0.900
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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