Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Kynu | LOC111230009 | ENSSDUP00000018252 | ENSSDUP00000026987 | Kynureninase. | Indoleamine 2,3-dioxygenase 1. | 0.958 |
Kynu | aadat | ENSSDUP00000018252 | ENSSDUP00000010592 | Kynureninase. | Aminoadipate aminotransferase. | 0.958 |
Kynu | afmid | ENSSDUP00000018252 | ENSSDUP00000001814 | Kynureninase. | Kynurenine formamidase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation. Kynurenine may be further oxidized to nicotinic acid, NAD(H) and NADP(H). Required for elimination of toxic metabolites. | 0.980 |
Kynu | cat | ENSSDUP00000018252 | ENSSDUP00000032627 | Kynureninase. | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | 0.916 |
Kynu | coq6 | ENSSDUP00000018252 | ENSSDUP00000003527 | Kynureninase. | Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6. | 0.894 |
Kynu | haao | ENSSDUP00000018252 | ENSSDUP00000001072 | Kynureninase. | 3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate; Belongs to the 3-HAO family. | 0.994 |
Kynu | kmo | ENSSDUP00000018252 | ENSSDUP00000027056 | Kynureninase. | Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid. | 0.993 |
Kynu | kyat1 | ENSSDUP00000018252 | ENSSDUP00000010834 | Kynureninase. | Kynurenine aminotransferase 1. | 0.969 |
Kynu | kyat3 | ENSSDUP00000018252 | ENSSDUP00000030988 | Kynureninase. | Kynurenine aminotransferase 3. | 0.969 |
Kynu | tdo2 | ENSSDUP00000018252 | ENSSDUP00000002277 | Kynureninase. | Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. | 0.994 |
LOC111230009 | Kynu | ENSSDUP00000026987 | ENSSDUP00000018252 | Indoleamine 2,3-dioxygenase 1. | Kynureninase. | 0.958 |
LOC111230009 | afmid | ENSSDUP00000026987 | ENSSDUP00000001814 | Indoleamine 2,3-dioxygenase 1. | Kynurenine formamidase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation. Kynurenine may be further oxidized to nicotinic acid, NAD(H) and NADP(H). Required for elimination of toxic metabolites. | 0.964 |
LOC111230009 | haao | ENSSDUP00000026987 | ENSSDUP00000001072 | Indoleamine 2,3-dioxygenase 1. | 3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate; Belongs to the 3-HAO family. | 0.607 |
LOC111230009 | kmo | ENSSDUP00000026987 | ENSSDUP00000027056 | Indoleamine 2,3-dioxygenase 1. | Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid. | 0.591 |
LOC111230009 | kyat1 | ENSSDUP00000026987 | ENSSDUP00000010834 | Indoleamine 2,3-dioxygenase 1. | Kynurenine aminotransferase 1. | 0.448 |
LOC111230009 | kyat3 | ENSSDUP00000026987 | ENSSDUP00000030988 | Indoleamine 2,3-dioxygenase 1. | Kynurenine aminotransferase 3. | 0.448 |
LOC111230009 | tdo2 | ENSSDUP00000026987 | ENSSDUP00000002277 | Indoleamine 2,3-dioxygenase 1. | Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. | 0.985 |
aadat | Kynu | ENSSDUP00000010592 | ENSSDUP00000018252 | Aminoadipate aminotransferase. | Kynureninase. | 0.958 |
aadat | afmid | ENSSDUP00000010592 | ENSSDUP00000001814 | Aminoadipate aminotransferase. | Kynurenine formamidase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation. Kynurenine may be further oxidized to nicotinic acid, NAD(H) and NADP(H). Required for elimination of toxic metabolites. | 0.939 |
aadat | haao | ENSSDUP00000010592 | ENSSDUP00000001072 | Aminoadipate aminotransferase. | 3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate; Belongs to the 3-HAO family. | 0.598 |
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