STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000018889FERM domain-containing protein. (818 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.692
CASK-2
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.692
mpp1
Membrane protein, palmitoylated 1; Belongs to the MAGUK family.
   
 0.507
cntnap1
Contactin associated protein 1.
    
 
 0.454
epb41l5
Erythrocyte membrane protein band 4.1 like 5.
     
0.452
LOC111217489
Anion exchange protein.
   
  
 0.450
LOC111235206
Adducin 3 (gamma) b.
      
 0.437
add2
Adducin 2 (beta).
      
 0.429
sptan1
Spectrin alpha, non-erythrocytic 1.
   
 0.422
add1
Adducin 1 (alpha).
      
 0.418
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.