STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111220349cGMP-dependent protein kinase. (689 aa)    
Predicted Functional Partners:
akap10
A kinase (PRKA) anchor protein 10.
    
 0.629
prkacb
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
0.598
prkaca
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.
   
0.598
LOC111230565
THAP-type domain-containing protein.
   
 0.598
LOC111227008
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.
   
0.598
prkx
Protein kinase X-linked; Belongs to the protein kinase superfamily.
   
0.598
ENSSDUP00000026101
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
0.598
pts
6-pyruvoyl tetrahydrobiopterin synthase.
    
  0.550
polr2f
Polymerase (RNA) II (DNA directed) polypeptide F.
    
 
 0.498
Mrvi1
Murine retrovirus integration site 1 homolog.
   
 0.493
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.