STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cep83Centrosomal protein 83. (728 aa)    
Predicted Functional Partners:
sclt1
Sodium channel and clathrin linker 1.
   
 0.694
ift20
Intraflagellar transport 20 homolog (Chlamydomonas).
   
 0.693
ENSSDUP00000017126
Uncharacterized protein.
    
 0.676
cep89
Centrosomal protein 89.
     
 0.664
fbf1
Uncharacterized protein.
    
 0.641
rab3ip
RAB3A interacting protein (rabin3).
     
 0.611
LOC111229619
RAB3A interacting protein (rabin3)-like 1.
     
 0.611
stx5
Syntaxin 5A; Belongs to the syntaxin family.
    
 0.610
uso1
USO1 vesicle transport factor.
   
 0.602
cep135
Centrosomal protein 135.
   
 0.601
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.