STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plpbpPyridoxal phosphate homeostasis protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which may be involved in intracellular homeostatic regulation of pyridoxal 5'- phosphate (PLP), the active form of vitamin B6. (294 aa)    
Predicted Functional Partners:
lacc1
Laccase (multicopper oxidoreductase) domain containing 1.
  
  
 0.928
aadat
Aminoadipate aminotransferase.
  
 
 0.803
LOC111218797
Pyridoxal (pyridoxine, vitamin B6) kinase a.
  
  
 0.749
LOC111223893
Pyridoxal (pyridoxine, vitamin B6) kinase b.
  
  
 0.749
suox
Sulfite oxidase.
     
 0.695
LOC111218551
Heat shock 10 protein 1; Belongs to the GroES chaperonin family.
     
 0.677
pipox
Pipecolic acid oxidase.
    
 0.669
cth
Cystathionase (cystathionine gamma-lyase), like.
  
  
 0.658
pnpo
Pyridoxamine 5'-phosphate oxidase.
      
 0.654
ENSSDUP00000008996
Immunoresponsive gene 1, like.
    
 0.615
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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