Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC111220196 | LOC111220550 | ENSSDUP00000019333 | ENSSDUP00000028451 | Threonine aldolase 1. | PALP domain-containing protein. | 0.961 |
LOC111220196 | LOC111225598 | ENSSDUP00000019333 | ENSSDUP00000018446 | Threonine aldolase 1. | Serine dehydratase-like. | 0.949 |
LOC111220196 | LOC111238989 | ENSSDUP00000019333 | ENSSDUP00000012581 | Threonine aldolase 1. | Serine--pyruvate aminotransferase. | 0.993 |
LOC111220196 | SDS | ENSSDUP00000019333 | ENSSDUP00000029263 | Threonine aldolase 1. | Serine dehydratase. | 0.949 |
LOC111220196 | agxt | ENSSDUP00000019333 | ENSSDUP00000030775 | Threonine aldolase 1. | Serine--pyruvate aminotransferase. | 0.993 |
LOC111220196 | gcat | ENSSDUP00000019333 | ENSSDUP00000024214 | Threonine aldolase 1. | Glycine C-acetyltransferase. | 0.959 |
LOC111220196 | pipox | ENSSDUP00000019333 | ENSSDUP00000027113 | Threonine aldolase 1. | Pipecolic acid oxidase. | 0.950 |
LOC111220196 | sardh | ENSSDUP00000019333 | ENSSDUP00000000532 | Threonine aldolase 1. | Sarcosine dehydrogenase. | 0.980 |
LOC111220196 | shmt1 | ENSSDUP00000019333 | ENSSDUP00000026097 | Threonine aldolase 1. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.947 |
LOC111220196 | shmt2 | ENSSDUP00000019333 | ENSSDUP00000026889 | Threonine aldolase 1. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.947 |
LOC111220550 | LOC111220196 | ENSSDUP00000028451 | ENSSDUP00000019333 | PALP domain-containing protein. | Threonine aldolase 1. | 0.961 |
LOC111220550 | LOC111225598 | ENSSDUP00000028451 | ENSSDUP00000018446 | PALP domain-containing protein. | Serine dehydratase-like. | 0.918 |
LOC111220550 | LOC111238989 | ENSSDUP00000028451 | ENSSDUP00000012581 | PALP domain-containing protein. | Serine--pyruvate aminotransferase. | 0.934 |
LOC111220550 | SDS | ENSSDUP00000028451 | ENSSDUP00000029263 | PALP domain-containing protein. | Serine dehydratase. | 0.918 |
LOC111220550 | agxt | ENSSDUP00000028451 | ENSSDUP00000030775 | PALP domain-containing protein. | Serine--pyruvate aminotransferase. | 0.934 |
LOC111220550 | shmt1 | ENSSDUP00000028451 | ENSSDUP00000026097 | PALP domain-containing protein. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.952 |
LOC111220550 | shmt2 | ENSSDUP00000028451 | ENSSDUP00000026889 | PALP domain-containing protein. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.952 |
LOC111225598 | LOC111220196 | ENSSDUP00000018446 | ENSSDUP00000019333 | Serine dehydratase-like. | Threonine aldolase 1. | 0.949 |
LOC111225598 | LOC111220550 | ENSSDUP00000018446 | ENSSDUP00000028451 | Serine dehydratase-like. | PALP domain-containing protein. | 0.918 |
LOC111225598 | LOC111238989 | ENSSDUP00000018446 | ENSSDUP00000012581 | Serine dehydratase-like. | Serine--pyruvate aminotransferase. | 0.936 |
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