STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000019470Nectin cell adhesion molecule 3b. (552 aa)    
Predicted Functional Partners:
nectin1
Nectin cell adhesion molecule 1b.
    
0.988
LOC111220842
PVR cell adhesion molecule related 2 like.
    
 
0.925
LOC111230064
Si:ch73-22o12.1.
    
 
0.925
pard3
Par-3 family cell polarity regulator alpha, b.
   
 0.912
LOC111232338
Uncharacterized protein.
  
  
 
0.902
ENSSDUP00000000705
Uncharacterized protein.
    
 0.900
LOC111234579
Nectin cell adhesion molecule 1a.
     
 
0.900
LOC111218539
Uncharacterized protein.
     
 
0.900
LOC111230059
Uncharacterized protein.
     
 
0.900
afdn
Afadin, adherens junction formation factor a.
    
 0.841
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.