STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cryzl1Crystallin, zeta (quinone reductase)-like 1. (327 aa)    
Predicted Functional Partners:
ppp1r21
Protein phosphatase 1, regulatory subunit 21.
    
   0.865
xylb
Xylulokinase homolog (H. influenzae).
     
 0.650
urb1
URB1 ribosome biogenesis homolog.
      
 0.646
mecr
Mitochondrial trans-2-enoyl-CoA reductase.
   
  
 0.632
ZADH2
Zinc binding alcohol dehydrogenase domain containing 2.
      
 0.605
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 0.603
crym
Crystallin, mu.
   
  
 0.593
tmem242
Transmembrane protein 242.
      
 0.583
cryl1
Crystallin, lambda 1.
  
  
 0.580
adhfe1
Alcohol dehydrogenase iron containing 1.
     
 0.568
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.