STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nr6a1Nuclear receptor subfamily 6, group A, member 1a. (492 aa)    
Predicted Functional Partners:
ncor1
Nuclear receptor corepressor 1.
    
 0.727
ncor2
Nuclear receptor corepressor 2.
    
 0.727
med1
Mediator complex subunit 1.
    
  0.655
mul1
Mitochondrial E3 ubiquitin protein ligase 1b.
    
 
 0.506
LOC111229093
Mitochondrial E3 ubiquitin protein ligase 1a.
    
 
 0.506
SYDE1
Synapse defective Rho GTPase homolog 1.
      
 0.470
alkbh7
AlkB homolog 7.
      
 0.430
csrnp2
Cysteine-serine-rich nuclear protein 2.
      
 0.418
mc1r
Melanocyte-stimulating hormone receptor; Receptor for MSH (alpha, beta and gamma) and ACTH. The activity of this receptor is mediated by G proteins which activate adenylate cyclase; Belongs to the G-protein coupled receptor 1 family.
     
 0.411
hhex
Homeobox domain-containing protein.
      
 0.403
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (16%) [HD]