STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ythdf3YTH N(6)-methyladenosine RNA binding protein 3. (603 aa)    
Predicted Functional Partners:
mettl14
Methyltransferase like 14; Belongs to the MT-A70-like family.
  
   
 0.694
wtap
WT1 associated protein.
  
  
 0.688
ZFC3H1
Zinc finger C3H1-type containing.
    
 
 0.673
alkbh5
AlkB homolog 5, RNA demethylase.
      
 0.600
LOC111222475
Eukaryotic translation initiation factor 4, gamma 2b.
   
 
 0.579
mettl3
Methyltransferase like 3; Belongs to the MT-A70-like family.
  
   
 0.579
fto
FTO alpha-ketoglutarate dependent dioxygenase.
      
 0.538
rbm15
RNA binding motif protein 15.
      
 0.538
zc3h13
Zinc finger CCCH-type containing 13.
      
 0.538
cnot8
CCR4-NOT transcription complex, subunit 8.
   
 
 0.513
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.