STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000020039RP1 axonemal microtubule associated. (237 aa)    
Predicted Functional Partners:
cdc73
Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).
   
 0.742
pot1
Protection of telomeres 1 homolog.
    
 
 0.730
paf1
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.682
cinp
Cyclin-dependent kinase 2 interacting protein.
    
 0.650
ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.650
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
   
 
 0.600
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
 
 0.600
LOC111232562
Aurora kinase B; Belongs to the protein kinase superfamily.
    
 
 0.574
aurka
Aurora kinase A; Belongs to the protein kinase superfamily.
    
 
 0.574
rtf1
RTF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.569
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.