STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MEF2DMyocyte enhancer factor 2D. (598 aa)    
Predicted Functional Partners:
mef2b
Myocyte enhancer factor 2b.
    
0.971
myog
Myogenin.
    
 0.721
cabin1
Calcineurin binding protein 1.
    
 
 0.654
LOC111226631
NK2 homeobox 5.
    
 
 0.637
myf6
Myogenic factor 6.
    
 0.637
mef2c
Myocyte enhancer factor 2cb.
  
0.570
LOC111218336
MADS-box domain-containing protein.
  
0.568
mef2a
Myocyte enhancer factor 2aa.
  
0.564
mapk6
Mitogen-activated protein kinase 6.
    
 0.549
LOC111221706
Mitogen-activated protein kinase.
   
 0.540
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.