STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111225507Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (336 aa)    
Predicted Functional Partners:
LOC111217580
Intersectin 2b.
   
 0.842
itsn2
Intersectin 2a.
   
 0.842
ppp1r7
Protein phosphatase 1, regulatory (inhibitor) subunit 7.
 
 
 0.826
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
   
 0.809
ints1
Integrator complex subunit 1.
    
   0.795
ppp1r11
Protein phosphatase 1, regulatory (inhibitor) subunit 11.
   
 
 0.772
LOC111217994
Protein phosphatase 1 regulatory subunit.
   
 0.762
LOC111219364
PRKG1_interact domain-containing protein.
   
 0.757
ppp1r12a
Protein phosphatase 1 regulatory subunit.
   
 0.757
LOC111229837
Protein phosphatase 1 regulatory subunit.
   
 0.757
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.