STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111236667Uncharacterized protein. (1078 aa)    
Predicted Functional Partners:
calm2
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
   
 
 0.557
calm3
Calmodulin 3.
   
 
 0.557
LOC111216424
Calmodulin.
   
 
 0.557
LOC111225267
Calmodulin.
   
 
 0.557
LOC111223622
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.537
LOC111227336
Calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 2; Belongs to the protein kinase superfamily.
    
 
 0.537
LOC111231374
Calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 2.
    
 
 0.537
camk2a
Calcium/calmodulin-dependent protein kinase II alpha; Belongs to the protein kinase superfamily.
    
 
 0.537
camk2b
Calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 2.
    
 
 0.537
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 
 0.533
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.