Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSSDUP00000008987 | ENSSDUP00000020234 | ENSSDUP00000008987 | ENSSDUP00000020234 | TROVE domain-containing protein. | Uncharacterized protein. | 0.472 |
ENSSDUP00000008987 | col22a1 | ENSSDUP00000008987 | ENSSDUP00000002566 | TROVE domain-containing protein. | Collagen, type XXII, alpha 1. | 0.707 |
ENSSDUP00000008987 | ppib | ENSSDUP00000008987 | ENSSDUP00000032721 | TROVE domain-containing protein. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.487 |
ENSSDUP00000020234 | ENSSDUP00000008987 | ENSSDUP00000020234 | ENSSDUP00000008987 | Uncharacterized protein. | TROVE domain-containing protein. | 0.472 |
ENSSDUP00000020234 | LOC111222221 | ENSSDUP00000020234 | ENSSDUP00000027547 | Uncharacterized protein. | Serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a; Belongs to the serpin family. | 0.417 |
ENSSDUP00000020234 | LOC111233403 | ENSSDUP00000020234 | ENSSDUP00000018236 | Uncharacterized protein. | Serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b; Belongs to the serpin family. | 0.417 |
ENSSDUP00000020234 | LOC111239991 | ENSSDUP00000020234 | ENSSDUP00000002873 | Uncharacterized protein. | Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3. | 0.403 |
ENSSDUP00000020234 | col22a1 | ENSSDUP00000020234 | ENSSDUP00000002566 | Uncharacterized protein. | Collagen, type XXII, alpha 1. | 0.437 |
ENSSDUP00000020234 | plod1 | ENSSDUP00000020234 | ENSSDUP00000002826 | Uncharacterized protein. | Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a. | 0.403 |
ENSSDUP00000020234 | plod2 | ENSSDUP00000020234 | ENSSDUP00000007850 | Uncharacterized protein. | Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2. | 0.403 |
ENSSDUP00000020234 | ppib | ENSSDUP00000020234 | ENSSDUP00000032721 | Uncharacterized protein. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.430 |
LOC111222221 | ENSSDUP00000020234 | ENSSDUP00000027547 | ENSSDUP00000020234 | Serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a; Belongs to the serpin family. | Uncharacterized protein. | 0.417 |
LOC111222221 | col22a1 | ENSSDUP00000027547 | ENSSDUP00000002566 | Serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a; Belongs to the serpin family. | Collagen, type XXII, alpha 1. | 0.516 |
LOC111222221 | ppib | ENSSDUP00000027547 | ENSSDUP00000032721 | Serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a; Belongs to the serpin family. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.597 |
LOC111233403 | ENSSDUP00000020234 | ENSSDUP00000018236 | ENSSDUP00000020234 | Serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b; Belongs to the serpin family. | Uncharacterized protein. | 0.417 |
LOC111233403 | col22a1 | ENSSDUP00000018236 | ENSSDUP00000002566 | Serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b; Belongs to the serpin family. | Collagen, type XXII, alpha 1. | 0.516 |
LOC111233403 | ppib | ENSSDUP00000018236 | ENSSDUP00000032721 | Serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b; Belongs to the serpin family. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.597 |
LOC111239991 | ENSSDUP00000020234 | ENSSDUP00000002873 | ENSSDUP00000020234 | Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3. | Uncharacterized protein. | 0.403 |
LOC111239991 | col22a1 | ENSSDUP00000002873 | ENSSDUP00000002566 | Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3. | Collagen, type XXII, alpha 1. | 0.459 |
LOC111239991 | plod1 | ENSSDUP00000002873 | ENSSDUP00000002826 | Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3. | Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a. | 0.901 |
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