STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000020281Uncharacterized protein. (285 aa)    
Predicted Functional Partners:
neu1
Neuraminidase 1.
   
 0.626
glb1
Galactosidase, beta 1; Belongs to the glycosyl hydrolase 35 family.
   
 0.459
ENSSDUP00000004648
Uncharacterized protein.
   
 0.459
erlec1
Endoplasmic reticulum lectin 1.
   
 
 0.459
os9
OS9 endoplasmic reticulum lectin.
   
 
 0.459
LOC111233401
Beta-galactosidase.
   
 0.459
LOC111233415
Beta-galactosidase.
   
 0.459
LOC111218581
Galactosidase, beta 1-like; Belongs to the glycosyl hydrolase 35 family.
   
 0.459
LOC111222388
Beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) b; Belongs to the glycosyl hydrolase 35 family.
   
 0.459
LOC111217040
Stanniocalcin 2b.
   
 0.459
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.