STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sriUncharacterized protein. (182 aa)    
Predicted Functional Partners:
ENSSDUP00000031189
Uncharacterized protein.
   
 0.536
ENSSDUP00000031197
Uncharacterized protein.
   
 0.536
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
    0.535
ankrd40
Ankyrin repeat domain 40.
    
 
 0.434
LOC111220106
SEC31 homolog B, COPII coat complex component.
    
 
 0.434
sec31a
SEC31 homolog A, COPII coat complex component.
    
 
 0.434
capn15
Calpain 15; Belongs to the peptidase C2 family.
   
 0.418
LOC111235492
Uncharacterized protein; Belongs to the peptidase C2 family.
   
 0.418
capn9
Calpain 9; Belongs to the peptidase C2 family.
   
0.418
LOC111220564
Calpain 1, (mu/I) large subunit a; Belongs to the peptidase C2 family.
   
0.418
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.