STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111235993ZP domain-containing protein. (454 aa)    
Predicted Functional Partners:
LOC111228402
Uncharacterized protein.
  
 0.600
LOC111228644
Uncharacterized protein.
   
 0.519
LOC111228645
Uncharacterized protein.
   
 0.519
LOC111238973
Zona pellucida glycoprotein 2, like 2.
   
 0.502
ENSSDUP00000017224
ZP domain-containing protein.
   
 0.502
LOC111236890
Zona pellucida protein AX 1.
   
 0.500
LOC111236899
ZP domain-containing protein.
   
 0.500
fam107b
Family with sequence similarity 107 member B.
   
 0.500
ENSSDUP00000022921
ZP domain-containing protein.
   
 0.500
LOC111233007
ZP domain-containing protein.
   
 0.500
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.