STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111217338Sarcolemma associated protein b. (367 aa)    
Predicted Functional Partners:
fgfr1op2
FGFR1 oncogene partner 2.
    
 
 0.862
LOC111218551-2
MOB family member 4, phocein.
    
 
 0.838
LOC111239113
Programmed cell death 10a.
   
 
 0.801
LOC111225301
Programmed cell death 10b.
   
 
 0.801
ppp2r1b
Protein phosphatase 2, regulatory subunit A, beta b.
    
 
 0.800
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.783
sike1
Suppressor of IKBKE 1.
    
 
 0.769
strip2
Striatin interacting protein 2.
    
 
 0.709
LOC111222119
Striatin interacting protein 1.
    
 
 0.709
LOC111226526
Serine/threonine-protein phosphatase.
    
 
 0.614
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.