STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Muc15Uncharacterized protein. (121 aa)    
Predicted Functional Partners:
ENSSDUP00000018203
Si:ch211-191j22.3.
      
 0.572
blzf1
Basic leucine zipper nuclear factor 1.
      
 0.519
ENSSDUP00000023294
Uncharacterized protein.
     
 0.482
ENSSDUP00000000501
Si:ch73-105b23.6.
     
 0.454
Heg1
Uncharacterized protein.
     
 0.440
LOC111220352
Mucin 13b, cell surface associated.
     
 0.440
aasdh
Aminoadipate-semialdehyde dehydrogenase.
      
 0.418
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.