STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prkcqProtein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (719 aa)    
Predicted Functional Partners:
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
0.950
LOC111234378
Component of inhibitor of nuclear factor kappa B kinase complex.
    
0.950
LOC111220255
Protein kinase domain-containing protein.
    
0.931
LOC111226417
Mitogen-activated protein kinase.
    
 
0.907
LOC111219534
Mitogen-activated protein kinase.
    
 
0.907
mapk10
Mitogen-activated protein kinase.
    
 
0.907
LOC111235092
Mitogen-activated protein kinase.
    
 
0.907
ENSSDUP00000025274
Uncharacterized protein.
   
 0.795
pdpk1
3-phosphoinositide dependent protein kinase 1b.
    
0.762
raf1
Raf-1 proto-oncogene, serine/threonine kinase a.
    
0.698
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.