STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111237413Uncharacterized protein; Belongs to the MAGUK family. (1102 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
0.734
CASK-2
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
0.734
LOC111238469
Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.
   
 0.650
LOC111236133
Uncharacterized protein.
   
 0.650
LOC111217580
Intersectin 2b.
   
  0.593
itsn2
Intersectin 2a.
   
  0.593
LOC111237023
Discs, large (Drosophila) homolog-associated protein 2b.
    
 0.578
dlgap1
Discs, large (Drosophila) homolog-associated protein 1b.
    
 0.578
Dlgap2
Discs, large (Drosophila) homolog-associated protein 2a.
    
 0.578
Shank2
Uncharacterized protein.
   
 0.566
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.