STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtx3Metaxin. (307 aa)    
Predicted Functional Partners:
LOC111229689
SAMM50 sorting and assembly machinery component.
   
 0.927
samm50
Sorting and assembly machinery component 50 homolog, like.
   
 0.927
mtx2
Metaxin 2.
    
0.855
LOC111234450
Uncharacterized protein.
   
 0.804
LOC111230604
Translocase of outer mitochondrial membrane 40 homolog, like.
   
 0.804
tomm40
Translocase of outer mitochondrial membrane 40 homolog (yeast).
   
 0.804
tomm22
Translocase of outer mitochondrial membrane 22 homolog (yeast).
    
 0.793
TOMM7
Translocase of outer mitochondrial membrane 7.
    
 0.765
LOC111220842
PVR cell adhesion molecule related 2 like.
   
 0.707
LOC111230064
Si:ch73-22o12.1.
   
 0.707
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.