STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111222969Uncharacterized protein. (205 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.673
CASK-2
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.673
LOC111236830
Guanylate cyclase.
    
 0.668
LOC111234372
Guanylate cyclase.
    
 0.668
LOC111233425
Guanylate cyclase.
    
 0.668
wdr90
WD repeat domain 90.
    
 0.486
xpc
Xeroderma pigmentosum, complementation group C.
    
 0.484
ENSSDUP00000002313
PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.431
LOC111234069
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.431
ENSSDUP00000000545
Potassium voltage-gated channel, Shal-related subfamily, member 1; Belongs to the potassium channel family.
    
 0.410
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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