STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcp2Uncharacterized protein. (766 aa)    
Predicted Functional Partners:
pet100
PET100 cytochrome c oxidase chaperone.
      
 0.597
ENSSDUP00000031392
Laminin, alpha 3.
  
 
   0.564
atxn1l
Ataxin 1-like.
   
  
 0.516
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
      
 0.501
LOC111220059
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
      
 0.501
LOC111218977
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 0.486
LOC111222886
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 0.486
LOC111239835
ANK_REP_REGION domain-containing protein.
  
     0.457
LOC111229242
Guanine nucleotide binding protein (G protein) alpha v1.
   
 0.444
LOC111218964
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.
   
 0.444
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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