STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thoc6THO complex 6. (323 aa)    
Predicted Functional Partners:
thoc1
THO complex 1.
    
 0.999
thoc5
THO complex 5.
   
 0.996
thoc3
THO complex 3.
   
 0.995
thoc2
THO complex 2.
    
 0.995
thoc7
THO complex 7.
    
 0.995
zc3h13
Zinc finger CCCH-type containing 13.
    
 0.957
alyref
Aly/REF export factor.
   
 0.925
ALYREF
RRM domain-containing protein.
   
 0.851
sarnp
SAP domain containing ribonucleoprotein.
     
 0.841
DDX39A
DExD-box helicase 39A.
   
 0.821
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.