STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111232752Phosphoethanolamine methyltransferase. (485 aa)    
Predicted Functional Partners:
LOC111222971
Cytochrome P450, family 51; Belongs to the cytochrome P450 family.
   
 0.988
sigmar1
Sigma non-opioid intracellular receptor 1.
   
 0.980
fdft1
Farnesyl-diphosphate farnesyltransferase 1.
   
 0.976
lss
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 
 0.970
ERG28
Ergosterol biosynthesis 28 homolog.
    
 
 0.965
LOC111225164
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 
 0.962
sc5d
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
   
 
 0.962
pcyt1b
Phosphate cytidylyltransferase 1, choline, beta a.
  
 
 0.948
LOC111234454
Phosphate cytidylyltransferase 1, choline, beta b.
  
 
 0.948
pcyt1a
Phosphate cytidylyltransferase 1, choline, alpha a.
  
 
 0.948
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.