STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000022100Uncharacterized protein. (455 aa)    
Predicted Functional Partners:
sgsh
N-sulfoglucosamine sulfohydrolase (sulfamidase).
   
  
 0.569
tcap
Titin-cap (telethonin).
      
 0.560
pex7
Peroxisomal biogenesis factor 7.
      
 0.482
ENSSDUP00000004737
Uncharacterized protein.
    
   0.446
tmed10
Transmembrane p24 trafficking protein 10.
    
   0.446
LOC111217345
Uncharacterized protein.
      
 0.420
LOC111235735
Apolipoprotein Eb.
      
 0.418
arsg
Arylsulfatase G.
   
  
 0.417
hgsnat
Heparan-alpha-glucosaminide N-acetyltransferase.
      
 0.416
ENSSDUP00000025350
Si:dkey-192p21.6.
      
 0.416
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.