Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC111217926 | LOC111227612 | ENSSDUP00000005216 | ENSSDUP00000002279 | Si:dkey-237i9.8. | Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. | 0.764 |
LOC111217926 | LOC111230233 | ENSSDUP00000005216 | ENSSDUP00000022123 | Si:dkey-237i9.8. | Platelet/endothelial cell adhesion molecule 1. | 0.904 |
LOC111217926 | cd34 | ENSSDUP00000005216 | ENSSDUP00000025488 | Si:dkey-237i9.8. | Si:ch211-286o17.1. | 0.528 |
LOC111217926 | cd36 | ENSSDUP00000005216 | ENSSDUP00000026181 | Si:dkey-237i9.8. | CD36 molecule (thrombospondin receptor); Belongs to the CD36 family. | 0.580 |
LOC111217926 | cdh5 | ENSSDUP00000005216 | ENSSDUP00000028874 | Si:dkey-237i9.8. | Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins. | 0.708 |
LOC111217926 | ctnnb1 | ENSSDUP00000005216 | ENSSDUP00000016896 | Si:dkey-237i9.8. | Catenin (cadherin-associated protein), beta 1. | 0.666 |
LOC111217926 | inpp5d | ENSSDUP00000005216 | ENSSDUP00000030037 | Si:dkey-237i9.8. | Inositol polyphosphate-5-phosphatase D. | 0.691 |
LOC111217926 | plcg1 | ENSSDUP00000005216 | ENSSDUP00000023513 | Si:dkey-237i9.8. | 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades. | 0.562 |
LOC111217926 | ptpn11 | ENSSDUP00000005216 | ENSSDUP00000032802 | Si:dkey-237i9.8. | Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. | 0.764 |
LOC111217926 | ptpn6 | ENSSDUP00000005216 | ENSSDUP00000016404 | Si:dkey-237i9.8. | Protein tyrosine phosphatase non-receptor type 6. | 0.770 |
LOC111227612 | LOC111217926 | ENSSDUP00000002279 | ENSSDUP00000005216 | Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. | Si:dkey-237i9.8. | 0.764 |
LOC111227612 | LOC111230233 | ENSSDUP00000002279 | ENSSDUP00000022123 | Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. | Platelet/endothelial cell adhesion molecule 1. | 0.764 |
LOC111227612 | inpp5d | ENSSDUP00000002279 | ENSSDUP00000030037 | Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. | Inositol polyphosphate-5-phosphatase D. | 0.654 |
LOC111227612 | ptpn11 | ENSSDUP00000002279 | ENSSDUP00000032802 | Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. | Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. | 0.901 |
LOC111230233 | LOC111217926 | ENSSDUP00000022123 | ENSSDUP00000005216 | Platelet/endothelial cell adhesion molecule 1. | Si:dkey-237i9.8. | 0.904 |
LOC111230233 | LOC111227612 | ENSSDUP00000022123 | ENSSDUP00000002279 | Platelet/endothelial cell adhesion molecule 1. | Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. | 0.764 |
LOC111230233 | cd34 | ENSSDUP00000022123 | ENSSDUP00000025488 | Platelet/endothelial cell adhesion molecule 1. | Si:ch211-286o17.1. | 0.610 |
LOC111230233 | cd36 | ENSSDUP00000022123 | ENSSDUP00000026181 | Platelet/endothelial cell adhesion molecule 1. | CD36 molecule (thrombospondin receptor); Belongs to the CD36 family. | 0.580 |
LOC111230233 | cdh5 | ENSSDUP00000022123 | ENSSDUP00000028874 | Platelet/endothelial cell adhesion molecule 1. | Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins. | 0.708 |
LOC111230233 | ctnnb1 | ENSSDUP00000022123 | ENSSDUP00000016896 | Platelet/endothelial cell adhesion molecule 1. | Catenin (cadherin-associated protein), beta 1. | 0.666 |
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