STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arhgdiaRho GDP dissociation inhibitor (GDI) alpha. (246 aa)    
Predicted Functional Partners:
LOC111217770
Nerve growth factor receptor a (TNFR superfamily, member 16).
    
 0.785
LOC111221873
Uncharacterized protein.
   
 0.769
CDC42
Cell division cycle 42.
   
 0.769
ENSSDUP00000003486
Uncharacterized protein.
   
 0.735
RAC1
Rac family small GTPase 1.
   
 0.735
LOC111227294
Uncharacterized protein.
   
 0.735
LOC111235860
Rac family small GTPase 2.
   
 0.735
RAC3
Rac family small GTPase 3b.
   
 0.735
LOC111233205
Uncharacterized protein.
   
 0.734
LOC111230104
Uncharacterized protein.
   
 0.734
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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