Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC111231102 | LOC111233740 | ENSSDUP00000017210 | ENSSDUP00000000948 | E2F transcription factor 5. | Retinoblastoma-like 2 (p130). | 0.993 |
LOC111231102 | ccna1 | ENSSDUP00000017210 | ENSSDUP00000019695 | E2F transcription factor 5. | Cyclin A1; Belongs to the cyclin family. | 0.743 |
LOC111231102 | ccna2 | ENSSDUP00000017210 | ENSSDUP00000011067 | E2F transcription factor 5. | Cyclin A2; Belongs to the cyclin family. | 0.743 |
LOC111231102 | cdk2 | ENSSDUP00000017210 | ENSSDUP00000005609 | E2F transcription factor 5. | Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily. | 0.575 |
LOC111231102 | e2f1 | ENSSDUP00000017210 | ENSSDUP00000020033 | E2F transcription factor 5. | E2F transcription factor 1. | 0.518 |
LOC111231102 | e2f2 | ENSSDUP00000017210 | ENSSDUP00000022548 | E2F transcription factor 5. | Si:ch211-160f23.5. | 0.695 |
LOC111231102 | lin9 | ENSSDUP00000017210 | ENSSDUP00000022972 | E2F transcription factor 5. | Lin-9 DREAM MuvB core complex component. | 0.849 |
LOC111231102 | rb1 | ENSSDUP00000017210 | ENSSDUP00000016983 | E2F transcription factor 5. | Retinoblastoma 1. | 0.973 |
LOC111231102 | rbl1 | ENSSDUP00000017210 | ENSSDUP00000013107 | E2F transcription factor 5. | Retinoblastoma-like 1 (p107). | 0.993 |
LOC111231102 | tfdp1 | ENSSDUP00000017210 | ENSSDUP00000008400 | E2F transcription factor 5. | Transcription factor. | 0.992 |
LOC111233740 | LOC111231102 | ENSSDUP00000000948 | ENSSDUP00000017210 | Retinoblastoma-like 2 (p130). | E2F transcription factor 5. | 0.993 |
LOC111233740 | ccna1 | ENSSDUP00000000948 | ENSSDUP00000019695 | Retinoblastoma-like 2 (p130). | Cyclin A1; Belongs to the cyclin family. | 0.754 |
LOC111233740 | ccna2 | ENSSDUP00000000948 | ENSSDUP00000011067 | Retinoblastoma-like 2 (p130). | Cyclin A2; Belongs to the cyclin family. | 0.754 |
LOC111233740 | cdk2 | ENSSDUP00000000948 | ENSSDUP00000005609 | Retinoblastoma-like 2 (p130). | Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily. | 0.973 |
LOC111233740 | e2f1 | ENSSDUP00000000948 | ENSSDUP00000020033 | Retinoblastoma-like 2 (p130). | E2F transcription factor 1. | 0.911 |
LOC111233740 | e2f2 | ENSSDUP00000000948 | ENSSDUP00000022548 | Retinoblastoma-like 2 (p130). | Si:ch211-160f23.5. | 0.935 |
LOC111233740 | lin9 | ENSSDUP00000000948 | ENSSDUP00000022972 | Retinoblastoma-like 2 (p130). | Lin-9 DREAM MuvB core complex component. | 0.892 |
LOC111233740 | rb1 | ENSSDUP00000000948 | ENSSDUP00000016983 | Retinoblastoma-like 2 (p130). | Retinoblastoma 1. | 0.945 |
LOC111233740 | rbl1 | ENSSDUP00000000948 | ENSSDUP00000013107 | Retinoblastoma-like 2 (p130). | Retinoblastoma-like 1 (p107). | 0.912 |
LOC111233740 | tfdp1 | ENSSDUP00000000948 | ENSSDUP00000008400 | Retinoblastoma-like 2 (p130). | Transcription factor. | 0.996 |
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