Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSSDUP00000004365 | LOC111217442 | ENSSDUP00000004365 | ENSSDUP00000022605 | Uncharacterized protein. | Notch receptor 3. | 0.469 |
ENSSDUP00000004365 | LOC111225378 | ENSSDUP00000004365 | ENSSDUP00000007173 | Uncharacterized protein. | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | 0.469 |
ENSSDUP00000004365 | LOC111232951 | ENSSDUP00000004365 | ENSSDUP00000026060 | Uncharacterized protein. | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | 0.469 |
ENSSDUP00000004365 | LOC111237618 | ENSSDUP00000004365 | ENSSDUP00000009461 | Uncharacterized protein. | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | 0.469 |
ENSSDUP00000004365 | jag1 | ENSSDUP00000004365 | ENSSDUP00000003069 | Uncharacterized protein. | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | 0.469 |
LOC111217442 | ENSSDUP00000004365 | ENSSDUP00000022605 | ENSSDUP00000004365 | Notch receptor 3. | Uncharacterized protein. | 0.469 |
LOC111217442 | LOC111225378 | ENSSDUP00000022605 | ENSSDUP00000007173 | Notch receptor 3. | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | 0.511 |
LOC111217442 | LOC111231549 | ENSSDUP00000022605 | ENSSDUP00000004704 | Notch receptor 3. | Recombination signal binding protein for immunoglobulin kappa J region a. | 0.774 |
LOC111217442 | LOC111232951 | ENSSDUP00000022605 | ENSSDUP00000026060 | Notch receptor 3. | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | 0.511 |
LOC111217442 | LOC111237618 | ENSSDUP00000022605 | ENSSDUP00000009461 | Notch receptor 3. | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | 0.511 |
LOC111217442 | jag1 | ENSSDUP00000022605 | ENSSDUP00000003069 | Notch receptor 3. | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | 0.511 |
LOC111217442 | maml1 | ENSSDUP00000022605 | ENSSDUP00000019516 | Notch receptor 3. | Mastermind-like transcriptional coactivator 1. | 0.581 |
LOC111217442 | rbpj | ENSSDUP00000022605 | ENSSDUP00000007612 | Notch receptor 3. | Recombination signal binding protein for immunoglobulin kappa J region. | 0.774 |
LOC111217442 | rps27a | ENSSDUP00000022605 | ENSSDUP00000004225 | Notch receptor 3. | Ribosomal protein S27a. | 0.452 |
LOC111217442 | snw1 | ENSSDUP00000022605 | ENSSDUP00000009921 | Notch receptor 3. | SNW domain containing 1. | 0.473 |
LOC111225378 | ENSSDUP00000004365 | ENSSDUP00000007173 | ENSSDUP00000004365 | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | Uncharacterized protein. | 0.469 |
LOC111225378 | LOC111217442 | ENSSDUP00000007173 | ENSSDUP00000022605 | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | Notch receptor 3. | 0.511 |
LOC111225378 | LOC111231549 | ENSSDUP00000007173 | ENSSDUP00000004704 | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | Recombination signal binding protein for immunoglobulin kappa J region a. | 0.520 |
LOC111225378 | LOC111237618 | ENSSDUP00000007173 | ENSSDUP00000009461 | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | 0.901 |
LOC111225378 | maml1 | ENSSDUP00000007173 | ENSSDUP00000019516 | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | Mastermind-like transcriptional coactivator 1. | 0.423 |
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