STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ganabGlucosidase, alpha; neutral AB; Belongs to the glycosyl hydrolase 31 family. (944 aa)    
Predicted Functional Partners:
LOC111239080
EF-hand domain-containing protein.
   
 0.994
prkcsh
Protein kinase C substrate 80K-H.
   
 0.994
mogs
Mannosyl-oligosaccharide glucosidase.
   
 0.972
gnptg
N-acetylglucosamine-1-phosphate transferase subunit gamma.
   
 0.944
LOC111221245
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
   
 
 0.941
man1b1
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
   
 
 0.941
LOC111217911
Uncharacterized protein.
    
 0.882
canx
Calnexin.
    
 0.882
snd1
Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.
   
    0.762
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
   
 
 0.756
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.