STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111228842Family with sequence similarity 102 member Ba. (370 aa)    
Predicted Functional Partners:
sec61g
SEC61 translocon gamma subunit.
   
 
 0.639
LOC111218687
Uncharacterized protein.
    
 
 0.446
LOC111228780
Uncharacterized protein.
    
 
 0.446
ENSSDUP00000002313
PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.
   
 0.435
pin4
Peptidyl-prolyl cis-trans isomerase.
 
   
 0.435
LOC111234069
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.435
pin1
Peptidyl-prolyl cis-trans isomerase.
    
 0.434
LOC111218754
Talin 2a.
    
 0.424
tln2
Talin 2b.
    
 0.424
tlnrd1
Talin rod domain containing 1.
    
 0.424
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.