STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tspoTranslocator protein. (161 aa)    
Predicted Functional Partners:
LOC111219998
NBR1 autophagy cargo receptor a.
      
 0.695
LOC111236255
PB1 domain-containing protein.
      
 0.695
vdac1
Voltage-dependent anion channel 1.
   
 
 0.694
LOC111238956
Uncharacterized protein.
    
 0.666
LOC111232323
Si:ch211-105f12.2.
    
 0.666
tspoap1
Uncharacterized protein.
    
 0.666
rimbp2
RIMS binding protein 2.
    
 0.666
star
Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.
      
 0.661
l3hypdh
Trans-L-3-hydroxyproline dehydratase.
   
    0.656
acbd3
Acyl-Coenzyme A binding domain containing 3.
      
 0.653
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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