STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jpt2Jupiter microtubule associated homolog 2. (239 aa)    
Predicted Functional Partners:
yars1
Tyrosine--tRNA ligase.
  
  
 0.646
LOC111236356
Jupiter microtubule associated homolog 1a.
      
0.594
cramp1
Cramped chromatin regulator homolog 1.
      
 0.573
mtrex
Mtr4 exosome RNA helicase.
      
 0.565
arsg
Arylsulfatase G.
      
 0.512
corin
Corin, serine peptidase.
      
 0.447
jpt1
Uncharacterized protein.
      
0.440
hddc3
HD domain containing 3.
  
    0.434
rnpepl1
Arginyl aminopeptidase like 1.
      
 0.428
GPR82
G protein-coupled receptor 82.
      
 0.424
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.