STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tesTestis derived transcript (3 LIM domains). (638 aa)    
Predicted Functional Partners:
LOC111222556
Vasodilator stimulated phosphoprotein b.
   
 0.632
Enah
WH1 domain-containing protein.
   
 0.632
LOC111238372
Enah/Vasp-like b.
   
 0.632
LOC111234396
WH1 domain-containing protein.
   
 0.632
LOC111225515
Enah/Vasp-like.
   
 0.632
iah1
Isoamyl acetate hydrolyzing esterase 1 (putative).
      
 0.534
ERMP1
Endoplasmic reticulum metallopeptidase 1.
      
 0.532
LOC111239952
Vang-like protein.
    
 0.465
vangl2
Vang-like protein.
    
 0.465
VANGL1
Vang-like protein.
    
 0.465
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.