STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111226638Rho related BTB domain containing 4. (734 aa)    
Predicted Functional Partners:
LOC111217580
Intersectin 2b.
    
 0.990
itsn2
Intersectin 2a.
    
 0.990
klhl13
Kelch-like family member 13.
    
  0.908
LOC111226197
Kelch-like ECH-associated protein 1a.
    
  0.908
LOC111218632
Si:rp71-68n21.9.
    
  0.908
keap1
Kelch-like ECH-associated protein 1b.
    
  0.908
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.904
rhobtb2
Rho related BTB domain containing 2a.
  
  
 
0.901
ENSSDUP00000004365
Uncharacterized protein.
   
 0.807
LOC111224075
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.749
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.