STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
reep3Receptor expression-enhancing protein. (285 aa)    
Predicted Functional Partners:
LOC111222936
Uncharacterized protein.
    
 0.646
ENSSDUP00000019094
Uncharacterized protein.
    
 
 0.609
FIG4
FIG4 phosphoinositide 5-phosphatase.
      
 0.600
nemp1
Nuclear envelope integral membrane protein 1.
   
  
 0.480
htr2a
5-hydroxytryptamine (serotonin) receptor 2A, genome duplicate a.
      
 0.472
xxylt1
Xyloside xylosyltransferase 1.
   
  
 0.466
fut8
Alpha-(1,6)-fucosyltransferase; Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans. Belongs to the glycosyltransferase 23 family.
      
 0.435
ENSSDUP00000023349
Uncharacterized protein.
    
 
 0.433
dlgap3
Discs, large (Drosophila) homolog-associated protein 3.
      
 0.431
cep85
Centrosomal protein 85.
      
 0.431
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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