STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111217568Phosphoinositide phospholipase C. (1210 aa)    
Predicted Functional Partners:
ENSSDUP00000004233
Uncharacterized protein.
   
 
 0.812
LOC111224555
Pro-melanin-concentrating hormone.
   
 
 0.812
hcrtr2
Hypocretin (orexin) receptor 2.
   
 0.789
ENSSDUP00000010547
Motilin_assoc domain-containing protein.
     
 0.633
trh
Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems.
     
 0.626
nts
Neurotensin.
     
 0.617
LOC111230848
Oxytocin; Belongs to the vasopressin/oxytocin family.
   
 
 0.569
LOC111230843
Arginine vasopressin; Belongs to the vasopressin/oxytocin family.
   
 
 0.552
ENSSDUP00000012778
Melanin-concentrating hormone receptor 2; Belongs to the G-protein coupled receptor 1 family.
    
 0.540
ENSSDUP00000031756
NMU domain-containing protein.
     
 0.539
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.